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Y37E11B.1 C2H2-type domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 177118, updated on 4-Jan-2025

Summary

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Official Symbol
Y37E11B.1
Official Full Name
C2H2-type domain-containing protein
Primary source
WormBase:WBGene00021374
Locus tag
CELE_Y37E11B.1
See related
AllianceGenome:WB:WBGene00021374
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable chromatin insulator sequence binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be active in chromosome. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See Y37E11B.1 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
4
Sequence:
Chromosome: IV; NC_003282.8 (3579621..3580992)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene OToPetrin-Like;Otopetrin-1;Otopetrin-2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Enhancer of polycomb homolog 1-like Neighboring gene ncRNA Neighboring gene BLOC-1-related complex subunit 6 C-terminal helix domain-containing protein Neighboring gene Transcription initiation factor TFIID subunit 2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Extensive rewiring and complex evolutionary dynamics in a C. elegans multiparameter transcription factor network. Reece-Hoyes JS, et al. Mol Cell, 2013 Jul 11. PMID 23791784, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables chromatin insulator sequence binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in chromosome IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
C2H2-type domain-containing protein
NP_001023441.1
  • Confirmed by transcript evidence
NP_001367317.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    3579621..3580992
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001028270.4 → NP_001023441.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001023441.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KY65
    Conserved Domains (1) summary
    sd00017
    Location:14 → 34
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. NM_001380152.1 → NP_001367317.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9TYN5
    Conserved Domains (1) summary
    sd00017
    Location:2 → 19
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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