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F37C4.5 Protein F37C4.5 [ Caenorhabditis elegans ]

Gene ID: 177146, updated on 2-Nov-2024

Summary

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Official Symbol
F37C4.5
Official Full Name
Protein F37C4.5
Primary source
WormBase:WBGene00018145
Locus tag
CELE_F37C4.5
See related
AllianceGenome:WB:WBGene00018145
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in mitochondrion. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F37C4.5 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (3871831..3873806, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Zinc finger E-box-binding homeobox protein zag-1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Amino acid transporter Neighboring gene MARVEL domain-containing protein;Transmembrane protein 196 Neighboring gene Amino_oxidase domain-containing protein;Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 Neighboring gene YkgJ family cysteine cluster protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A conserved CCM complex promotes apoptosis non-autonomously by regulating zinc homeostasis. Chapman EM, et al. Nat Commun, 2019 Apr 17. PMID 30996251, Free PMC Article
  2. The demethylase NMAD-1 regulates DNA replication and repair in the Caenorhabditis elegans germline. Wang SY, et al. PLoS Genet, 2019 Jul. PMID 31283754, Free PMC Article
  3. Ribosomal protein RPS-14 modulates let-7 microRNA function in Caenorhabditis elegans. Chan SP, et al. Dev Biol, 2009 Oct 1. PMID 19627982, Free PMC Article
  4. SUMO peptidase ULP-4 regulates mitochondrial UPR-mediated innate immunity and lifespan extension. Gao K, et al. Elife, 2019 Jan 15. PMID 30642431, Free PMC Article
  5. CCAR-1 works together with the U2AF large subunit UAF-1 to regulate alternative splicing. Lugano DI, et al. RNA Biol, 2024 Jan. PMID 38126797, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Protein F37C4.5
NP_001023185.1
  • Confirmed by transcript evidence
NP_001367794.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    3871831..3873806 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001028014.5 → NP_001023185.1  Protein F37C4.5 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001023185.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O44400, Q86MF4
    Conserved Domains (1) summary
    TIGR02231
    Location:16 → 550
    TIGR02231; conserved hypothetical protein

  2. NM_001380170.1 → NP_001367794.1  Protein F37C4.5 [Caenorhabditis elegans]

    Status: REVIEWED

    Conserved Domains (1) summary
    pfam13598
    Location:1 → 306
    DUF4139; Domain of unknown function (DUF4139)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O44400.3

Gene LinkOut

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