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mcm-3AP PCI domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 177589, updated on 2-Nov-2024

Summary

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Official Symbol
mcm-3AP
Official Full Name
PCI domain-containing protein
Primary source
WormBase:WBGene00017642
Locus tag
CELE_F20D12.2
See related
AllianceGenome:WB:WBGene00017642
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in mRNA export from nucleus. Predicted to be part of transcription export complex 2. Predicted to be active in cytoplasm and nucleus. Is expressed in head; intestine; nervous system; and tail. Orthologous to human MCM3AP (minichromosome maintenance complex component 3 associated protein). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See mcm-3AP in Genome Data Viewer
Location:
chromosome: IV
Exon count:
10
Sequence:
Chromosome: IV; NC_003282.8 (7948672..7953548)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Centromere/kinetochore protein zw10 homolog Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Homeobox protein ceh-19 Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene Piwi domain-containing protein Neighboring gene Tyrosine-protein phosphatase domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in mRNA export from nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of transcription export complex 2 IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
PCI domain-containing protein
NP_501328.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    7948672..7953548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_068927.8 → NP_501328.1  PCI domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501328.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q19643
    Conserved Domains (2) summary
    pfam03399
    Location:291 → 582
    SAC3_GANP; SAC3/GANP family
    cl19107
    Location:687 → 788
    SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
Nucleotide Protein
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