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F56D5.6 Dentin sialophosphoprotein-like;FK506-binding protein 5-like;Protein hokC [ Caenorhabditis elegans ]

Gene ID: 177773, updated on 18-Sep-2024

Summary

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Official Symbol
F56D5.6
Official Full Name
Dentin sialophosphoprotein-like;FK506-binding protein 5-like;Protein hokC
Primary source
WormBase:WBGene00010150
Locus tag
CELE_F56D5.6
See related
AllianceGenome:WB:WBGene00010150
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See F56D5.6 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
12
Sequence:
Chromosome: IV; NC_003282.8 (9401922..9412663)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene DUF4477 domain-containing protein Neighboring gene NADH:flavin oxidoreductase/NADH oxidase N-terminal domain-containing protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene Coiled-coil domain-containing protein 69 Neighboring gene pseudo Neighboring gene BRCT domain-containing protein Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
Dentin sialophosphoprotein-like;FK506-binding protein 5-like;Protein hokC
NP_001263765.1
  • Confirmed by transcript evidence
NP_001263766.1
  • Confirmed by transcript evidence
NP_501658.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    9401922..9412663
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069257.4 → NP_501658.2  FK506-binding protein 5-like [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501658.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20881
    Conserved Domains (1) summary
    COG5271
    Location:154 → 391
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

  2. NM_001276836.3 → NP_001263765.1  Dentin sialophosphoprotein-like [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001263765.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    I2HAJ8
    Conserved Domains (1) summary
    COG5271
    Location:129 → 366
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

  3. NM_001276837.2 → NP_001263766.1  Protein hokC [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001263766.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    I2HAJ9
Nucleotide Protein
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