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egl-20 Protein Wnt [ Caenorhabditis elegans ]

Gene ID: 177821, updated on 9-Dec-2024

Summary

Official Symbol
egl-20
Official Full Name
Protein Wnt
Primary source
WormBase:WBGene00001188
Locus tag
CELE_W08D2.1
See related
AllianceGenome:WB:WBGene00001188
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Enables receptor tyrosine kinase binding activity. Involved in several processes, including neuron migration; positive regulation of axon guidance; and regulation of cell migration. Located in extracellular space. Is expressed in several structures, including hypodermis; muscle cell; neuroblasts; rectal epithelial cell; and somatic nervous system. Orthologous to human WNT16 (Wnt family member 16). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See egl-20 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
11
Sequence:
Chromosome: IV; NC_003282.8 (9812418..9815526, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Delta(6)-fatty-acid desaturase fat-3;Fatty acid desaturase domain-containing protein Neighboring gene RGS domain-containing protein Neighboring gene ncRNA Neighboring gene Cation-transporting ATPase 13A3;Cation-transporting P-type ATPase N-terminal domain-containing protein;putative cation-transporting ATPase W08D2.5 Neighboring gene ncRNA

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables cytokine activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables frizzled binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables frizzled binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables receptor ligand activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables receptor tyrosine kinase binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in Wnt signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in asymmetric cell division IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in canonical Wnt signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in canonical Wnt signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cell fate commitment IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cell migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in establishment of mitotic spindle orientation IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in generation of neurons IEA
Inferred from Electronic Annotation
more info
 
involved_in interneuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in left/right axis specification IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in mitochondrial unfolded protein response IDA
Inferred from Direct Assay
more info
PubMed 
involved_in motor neuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in motor neuron migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of motor neuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in neuroblast migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in neuroblast migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in neuron differentiation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in neuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of anterior/posterior axon guidance IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of distal tip cell migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of motor neuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of sensory neuron axon guidance IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in programmed cell death involved in cell development IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in programmed cell death involved in cell development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of cell migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of vulval development IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in sensory neuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IMP
Inferred from Mutant Phenotype
more info
PubMed 

General protein information

Preferred Names
Protein Wnt
NP_001366963.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    9812418..9815526 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001380420.2NP_001366963.1  Protein Wnt [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EG05
    Conserved Domains (1) summary
    cl38924
    Location:70393
    Wnt; Wnt domain found in the WNT signaling gene family, also called Wingless-type mouse mammary tumor virus (MMTV) integration site family