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mam-2 MAM domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 177854, updated on 2-Nov-2024

Summary

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Official Symbol
mam-2
Official Full Name
MAM domain-containing protein
Primary source
WormBase:WBGene00008150
Locus tag
CELE_C47E12.6
See related
AllianceGenome:WB:WBGene00008150
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See mam-2 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
13
Sequence:
Chromosome: IV; NC_003282.8 (9983195..9989678)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Dihydropyrimidinase 2 Neighboring gene Ribosomal RNA processing protein 1 homolog Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene E1 ubiquitin-activating enzyme Neighboring gene Inorganic pyrophosphatase 1 Neighboring gene alpha-1,2-Mannosidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
MAM domain-containing protein
NP_501799.4
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    9983195..9989678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069398.6 → NP_501799.4  MAM domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501799.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8I4M2
    Conserved Domains (2) summary
    smart00137
    Location:62 → 237
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    cl27660
    Location:459 → 613
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
Nucleotide Protein
Heading Accession and Version

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