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spe-17 Spermatogenesis-defective protein spe-17 [ Caenorhabditis elegans ]

Gene ID: 178136, updated on 4-Jan-2025

Summary

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Official Symbol
spe-17
Official Full Name
Spermatogenesis-defective protein spe-17
Primary source
WormBase:WBGene00004971
Locus tag
CELE_ZK617.3
See related
AllianceGenome:WB:WBGene00004971
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in spermatid development. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See spe-17 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (12013420..12014050)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Twitchin Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene LIPaSe related Neighboring gene Trans-Golgi network integral membrane protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and molecular characterization of the Caenorhabditis elegans spermatogenesis-defective gene spe-17. L'Hernault SW, et al. Genetics, 1993 Jul. PMID 8349108, Free PMC Article
  2. Male reproductive toxicity involved in spermatogenesis induced by perfluorooctane sulfonate and perfluorooctanoic acid in Caenorhabditis elegans. Yin J, et al. Environ Sci Pollut Res Int, 2021 Jan. PMID 32839910
  3. Spermatogenesis. L'Hernault SW. WormBook, 2006 Feb 20. PMID 18050478, Free PMC Article
  4. A global profile of germline gene expression in C. elegans. Reinke V, et al. Mol Cell, 2000 Sep. PMID 11030340
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
  
involved_in spermatid development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Spermatogenesis-defective protein spe-17
NP_502275.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    12013420..12014050
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069874.5 → NP_502275.1  Spermatogenesis-defective protein spe-17 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502275.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34890, Q23549
Nucleotide Protein
Heading Accession and Version

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