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Y57G11A.2 Vitelline membrane outer layer protein 1 [ Caenorhabditis elegans ]

Gene ID: 178389, updated on 4-Jan-2025

Summary

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Official Symbol
Y57G11A.2
Official Full Name
Vitelline membrane outer layer protein 1
Primary source
WormBase:WBGene00013290
Locus tag
CELE_Y57G11A.2
See related
AllianceGenome:WB:WBGene00013290
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in extracellular space. Orthologous to human VMO1 (vitelline membrane outer layer 1 homolog). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See Y57G11A.2 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
6
Sequence:
Chromosome: IV; NC_003282.8 (14517022..14519523, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Secreted protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Microtubule severing by the katanin complex is activated by PPFR-1-dependent MEI-1 dephosphorylation. Gomes JE, et al. J Cell Biol, 2013 Aug 5. PMID 23918937, Free PMC Article
  2. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Vitelline membrane outer layer protein 1
NP_502758.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    14517022..14519523 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_070357.5 → NP_502758.1  Vitelline membrane outer layer protein 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502758.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EBG1
    Conserved Domains (2) summary
    cd00220
    Location:22 → 200
    VMO-I; Vitelline membrane outer layer protein I (VMO-I) domain, VMO-I is one of the proteins found in the outer layer of the vitelline membrane of poultry eggs; VMO-I, lysozyme, and VMO-II are tightly bound to ovomucin; this complex forms the backbone of the ...
    pfam03762
    Location:24 → 199
    VOMI; Vitelline membrane outer layer protein I (VOMI)
Nucleotide Protein
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