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F33E11.3 Protein phosphatase 1 regulatory subunit 21 N-terminal domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 178556, updated on 2-Nov-2024

Summary

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Official Symbol
F33E11.3
Official Full Name
Protein phosphatase 1 regulatory subunit 21 N-terminal domain-containing protein
Primary source
WormBase:WBGene00018011
Locus tag
CELE_F33E11.3
See related
AllianceGenome:WB:WBGene00018011
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in early endosome. Orthologous to human PPP1R21 (protein phosphatase 1 regulatory subunit 21). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F33E11.3 in Genome Data Viewer
Location:
chromosome: V
Exon count:
5
Sequence:
Chromosome: V; NC_003283.11 (300021..304713, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene 'chromo' domain containing protein;Mediator complex subunit 6 Neighboring gene PHD finger protein 10;PHD-type domain-containing protein Neighboring gene Nuclear Hormone Receptor family Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of novel nicotinic receptor-associated proteins in Caenorhabditis elegans. Gottschalk A, et al. EMBO J, 2005 Jul 20. PMID 15990870, Free PMC Article
  2. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article
  3. A protein domain-based interactome network for C. elegans early embryogenesis. Boxem M, et al. Cell, 2008 Aug 8. PMID 18692475, Free PMC Article
  4. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in early endosome IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Protein phosphatase 1 regulatory subunit 21 N-terminal domain-containing protein
NP_503171.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    300021..304713 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_070770.7 → NP_503171.1  Protein phosphatase 1 regulatory subunit 21 N-terminal domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503171.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O61853
    Conserved Domains (2) summary
    pfam10205
    Location:17 → 90
    KLRAQ; Predicted coiled-coil domain-containing protein
    pfam10212
    Location:225 → 632
    TTKRSYEDQ; Predicted coiled-coil domain-containing protein
Nucleotide Protein
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