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srh-2 G protein-coupled receptor;Serpentine Receptor, class H [ Caenorhabditis elegans ]

Gene ID: 178584, updated on 4-Jan-2025

Summary

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Official Symbol
srh-2
Official Full Name
G protein-coupled receptor;Serpentine Receptor, class H
Primary source
WormBase:WBGene00005228
Locus tag
CELE_C05E4.14
See related
AllianceGenome:WB:WBGene00005228
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Is expressed in several structures, including Eala; Ealp; Eara; Earp; and intestine. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See srh-2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
10
Sequence:
Chromosome: V; NC_003283.11 (728301..734305)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene F-box domain-containing protein Neighboring gene Malate synthase Neighboring gene ncRNA Neighboring gene Serpentine Receptor, class J Neighboring gene Serpentine Receptor, class J

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Keller-Segel model for C elegans L1 aggregation. Avery L, et al. PLoS Comput Biol, 2021 Jul. PMID 34324494, Free PMC Article
  2. G protein-coupled receptor-based thermosensation determines temperature acclimatization of Caenorhabditis elegans. Ohnishi K, et al. Nat Commun, 2024 Feb 23. PMID 38396085, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
G protein-coupled receptor;Serpentine Receptor, class H
NP_001021364.2
  • Confirmed by transcript evidence
NP_001300041.1
  • Confirmed by transcript evidence
NP_001300042.1
  • Confirmed by transcript evidence
NP_001300043.1
  • Confirmed by transcript evidence
NP_001300044.1
  • Confirmed by transcript evidence
NP_001300045.1
  • Confirmed by transcript evidence
NP_001300046.1
  • Partially confirmed by transcript evidence
NP_001300047.1
  • Partially confirmed by transcript evidence
NP_001367443.1
  • Confirmed by transcript evidence
NP_001379628.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    728301..734305
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001392470.1 → NP_001379628.1  Serpentine Receptor, class H [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KYH0
    Conserved Domains (1) summary
    cl11665
    Location:20 → 253
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

  2. NM_001026193.4 → NP_001021364.2  G protein-coupled receptor [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021364.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    E4MVC8
    Conserved Domains (1) summary
    cl11665
    Location:82 → 177
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

  3. NM_001313113.1 → NP_001300042.1  Serpentine Receptor, class H [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3ART6
    Conserved Domains (1) summary
    cl11665
    Location:62 → 338
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

  4. NM_001313114.1 → NP_001300043.1  G protein-coupled receptor [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AVB8
    Conserved Domains (1) summary
    cl11665
    Location:88 → 183
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

  5. NM_001313115.1 → NP_001300044.1  Serpentine Receptor, class H [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AXL3
    Conserved Domains (1) summary
    cl11665
    Location:66 → 189
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

  6. NM_001380592.1 → NP_001367443.1  Serpentine Receptor, class H [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KYG9
    Conserved Domains (1) summary
    cl11665
    Location:56 → 332
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

  7. NM_001313112.1 → NP_001300041.1  Serpentine Receptor, class H [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AUP2
    Conserved Domains (1) summary
    cl11665
    Location:60 → 183
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

  8. NM_001313116.1 → NP_001300045.1  Serpentine Receptor, class H [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3ASA1
    Conserved Domains (1) summary
    cl11665
    Location:36 → 301
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

  9. NM_001313117.1 → NP_001300046.1  G protein-coupled receptor [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AUP8
    Conserved Domains (1) summary
    cl11665
    Location:51 → 146
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

  10. NM_001313118.1 → NP_001300047.1  Serpentine Receptor, class H [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3ARU0
    Conserved Domains (1) summary
    cl11665
    Location:29 → 152
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
Nucleotide Protein
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