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gly-7 Polypeptide N-acetylgalactosaminyltransferase;Ricin B lectin domain-containing protein;putative N-acetylgalactosaminyltransferase 7 [ Caenorhabditis elegans ]

Gene ID: 178661, updated on 4-Jan-2025

Summary

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Official Symbol
gly-7
Official Full Name
Polypeptide N-acetylgalactosaminyltransferase;Ricin B lectin domain-containing protein;putative N-acetylgalactosaminyltransferase 7
Primary source
WormBase:WBGene00001632
Locus tag
CELE_Y46H3A.6
See related
AllianceGenome:WB:WBGene00001632
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable polypeptide N-acetylgalactosaminyltransferase activity. Predicted to be involved in protein O-linked glycosylation. Predicted to be located in Golgi membrane. Predicted to be active in Golgi apparatus. Orthologous to human GALNT7 (polypeptide N-acetylgalactosaminyltransferase 7). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See gly-7 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (1815851..1821323, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene 7TM_GPCR_Srx domain-containing protein;Serpentine Receptor, class T Neighboring gene Cysteine-rich transmembrane CYSTM domain-containing protein;Lipoprotein;RadC domain-containing protein Neighboring gene Fungal lipase-like domain-containing protein Neighboring gene Mitochondrial Ribosomal Protein, Large Neighboring gene DUF148 domain-containing protein;Ntox28 domain-containing protein;STI1 domain-containing protein Neighboring gene NADH:flavin oxidoreductase/NADH oxidase N-terminal domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. cDNA cloning and expression of a family of UDP-N-acetyl-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase sequence homologs from Caenorhabditis elegans. Hagen FK, et al. J Biol Chem, 1998 Apr 3. PMID 9525933
  2. The terminal phase of cytokinesis in the Caenorhabditis elegans early embryo requires protein glycosylation. Wang H, et al. Mol Biol Cell, 2005 Sep. PMID 15987734, Free PMC Article
  3. Functional conservation of subfamilies of putative UDP-N-acetylgalactosamine:polypeptide N-acetylgalactosaminyltransferases in Drosophila, Caenorhabditis elegans, and mammals. One subfamily composed of l(2)35Aa is essential in Drosophila. Schwientek T, et al. J Biol Chem, 2002 Jun 21. PMID 11925450
  4. Carbohydrates and glycosylation. Berninsone PM. WormBook, 2006 Dec 18. PMID 18050430, Free PMC Article
  5. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
  
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables polypeptide N-acetylgalactosaminyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Polypeptide N-acetylgalactosaminyltransferase;Ricin B lectin domain-containing protein;putative N-acetylgalactosaminyltransferase 7
NP_001300252.1
  • Confirmed by transcript evidence
NP_001300253.1
  • Confirmed by transcript evidence
NP_503512.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    1815851..1821323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071111.6 → NP_503512.1  putative N-acetylgalactosaminyltransferase 7 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503512.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O61397
    Conserved Domains (3) summary
    cd02510
    Location:159 → 463
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:486 → 592
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:479 → 592
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. NM_001313323.4 → NP_001300252.1  Polypeptide N-acetylgalactosaminyltransferase [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3ASG4
    Conserved Domains (3) summary
    cd02510
    Location:116 → 420
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:443 → 549
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:436 → 549
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. NM_001313324.3 → NP_001300253.1  Ricin B lectin domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AW23
    Conserved Domains (2) summary
    pfam00652
    Location:207 → 320
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    cl11394
    Location:1 → 191
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O61397.1

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