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Y73C8C.8 RING-type domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 178753, updated on 2-Nov-2024

Summary

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Official Symbol
Y73C8C.8
Official Full Name
RING-type domain-containing protein
Primary source
WormBase:WBGene00022265
Locus tag
CELE_Y73C8C.8
See related
AllianceGenome:WB:WBGene00022265
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in innate immune response. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y73C8C.8 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (3110088..3113851, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Seven TM Receptor Neighboring gene pseudo Neighboring gene RING-type domain-containing protein Neighboring gene C-type lectin domain-containing protein Neighboring gene Serpentine Receptor, class T

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in innate immune response IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
RING-type domain-containing protein
NP_503853.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    3110088..3113851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071452.4 → NP_503853.2  RING-type domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9TXW5
    Conserved Domains (2) summary
    pfam13639
    Location:795 → 838
    zf-RING_2; Ring finger domain
    pfam12128
    Location:536 → 811
    DUF3584; Protein of unknown function (DUF3584)
Nucleotide Protein
Heading Accession and Version

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