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LOC17890548 late embryogenesis abundant protein At1g64065 [ Capsella rubella ]

Gene ID: 17890548, updated on 21-Dec-2023

Summary

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Gene symbol
LOC17890548
Gene description
late embryogenesis abundant protein At1g64065
Locus tag
CARUB_v10024064mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsella rubella
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Genomic context

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See LOC17890548 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Caprub1_0 (GCF_000375325.1) Unplaced Scaffold NW_006238920.1 (13376061..13376957)

NW_006238920.1Genomic Context describing neighboring genes Neighboring gene inositol 1,3,4-trisphosphate 5/6-kinase 4 Neighboring gene uncharacterized LOC17888288 Neighboring gene uncharacterized LOC17890461 Neighboring gene transcription termination factor MTERF4, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238920 Unplaced Scaffold Reference Caprub1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
late embryogenesis abundant protein At1g64065

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsella rubella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caprub1_0

Genomic

  1. NW_006238920.1 Reference Caprub1_0

    Range
    13376061..13376957
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006294930.2 → XP_006294992.1  late embryogenesis abundant protein At1g64065

    See identical proteins and their annotated locations for XP_006294992.1

    UniProtKB/TrEMBL
    R0HRF9
    Conserved Domains (1) summary
    cl12118
    Location:88 → 209
    LEA_2; Late embryogenesis abundant protein
Nucleotide Protein
Heading Accession and Version

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