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ZC250.2 N-acetylgalactosaminide beta-1,3-galactosyltransferase [ Caenorhabditis elegans ]

Gene ID: 178968, updated on 9-Dec-2024

Summary

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Official Symbol
ZC250.2
Official Full Name
N-acetylgalactosaminide beta-1,3-galactosyltransferase
Primary source
WormBase:WBGene00022576
Locus tag
CELE_ZC250.2
See related
AllianceGenome:WB:WBGene00022576
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable acetylglucosaminyltransferase activity. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Peters plus syndrome. Orthologous to human B3GLCT (beta 3-glucosyltransferase). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See ZC250.2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (5792331..5794857)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Nuclear Hormone Receptor family Neighboring gene ncRNA Neighboring gene Rab5-interacting protein Neighboring gene UDP-galactose transporter Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
N-acetylgalactosaminide beta-1,3-galactosyltransferase
NP_504520.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    5792331..5794857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072119.3 → NP_504520.2  N-acetylgalactosaminide beta-1,3-galactosyltransferase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504520.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    G4SIR8, O01878
    Conserved Domains (1) summary
    cl21608
    Location:231 → 424
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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