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C06H2.2 START domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 179542, updated on 9-Dec-2024

Summary

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Official Symbol
C06H2.2
Official Full Name
START domain-containing protein
Primary source
WormBase:WBGene00007386
Locus tag
CELE_C06H2.2
See related
AllianceGenome:WB:WBGene00007386
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable lipid binding activity. Human ortholog(s) of this gene implicated in familial adult myoclonic epilepsy 2. Orthologous to human STARD7 (StAR related lipid transfer domain containing 7). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See C06H2.2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
5
Sequence:
Chromosome: V; NC_003283.11 (11125222..11127303)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit d, mitochondrial Neighboring gene Late endosomal/lysosomal adaptor and MAPK and MTOR activator 5 Neighboring gene Glucosamine 6-phosphate N-acetyltransferase;N-acetyltransferase domain-containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
START domain-containing protein
NP_505830.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    11125222..11127303
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073429.6 → NP_505830.3  START domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_505830.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q17764
    Conserved Domains (1) summary
    cl14643
    Location:71 → 272
    SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily
Nucleotide Protein
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