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cal-1 Calmodulin-like protein;EF-hand domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 179715, updated on 9-Dec-2024

Summary

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Official Symbol
cal-1
Official Full Name
Calmodulin-like protein;EF-hand domain-containing protein
Primary source
WormBase:WBGene00000285
Locus tag
CELE_C13C12.1
See related
AllianceGenome:WB:WBGene00000285
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable calcium ion binding activity. Predicted to be active in centrosome and cytoplasm. Orthologous to human CALML3 (calmodulin like 3); CALML4 (calmodulin like 4); and CALML5 (calmodulin like 5). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See cal-1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
3
Sequence:
Chromosome: V; NC_003283.11 (12514835..12517248, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ShKT domain-containing protein Neighboring gene legumain Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A novel calmodulin-like gene from the nematode Caenorhabditis elegans. Salvato M, et al. J Mol Biol, 1986 Aug 5. PMID 3783700
  2. Molecular evolution of the multiple calmodulin-like cal genes in C. elegans and in nematodes. Karabinos A. Dev Genes Evol, 2016 Sep. PMID 27558386
  3. Natural variation and population genetics of Caenorhabditis elegans. Barrière A, et al. WormBook, 2005 Dec 26. PMID 18050391, Free PMC Article
  4. Rates of deleterious mutation and the evolution of sex in Caenorhabditis. Cutter AD, et al. J Evol Biol, 2003 Sep. PMID 14635896
  5. Cytokinesis is not controlled by calmodulin or myosin light chain kinase in the Caenorhabditis elegans early embryo. Batchelder EL, et al. FEBS Lett, 2007 Sep 4. PMID 17716666, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables calcium ion binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in centrosome IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Calmodulin-like protein;EF-hand domain-containing protein
NP_001256428.1
  • Confirmed by transcript evidence
NP_001256429.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    12514835..12517248 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001269499.3 → NP_001256428.1  EF-hand domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256428.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2Z0
    Conserved Domains (1) summary
    cl25352
    Location:36 → 177
    EFh_PEF; The penta-EF hand (PEF) family

  2. NM_001269500.2 → NP_001256429.1  Calmodulin-like protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256429.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P04630
    Conserved Domains (1) summary
    PTZ00184
    Location:17 → 158
    PTZ00184; calmodulin; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P04630.1

Gene LinkOut

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