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grl-2 Ground-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 179777, updated on 2-Nov-2024

Summary

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Official Symbol
grl-2
Official Full Name
Ground-like domain-containing protein
Primary source
WormBase:WBGene00001711
Locus tag
CELE_T16G1.8
See related
AllianceGenome:WB:WBGene00001711
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in head and nervous system. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See grl-2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (12945075..12946858)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene CHK kinase-like domain-containing protein Neighboring gene CHK kinase-like domain-containing protein Neighboring gene ncRNA Neighboring gene EIF3k Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Caenorhabditis elegans Hedgehog-related proteins are tissue- and substructure-specific components of the cuticle and precuticle. Serra ND, et al. Genetics, 2024 Aug 7. PMID 38739761,
  2. Caenorhabditis elegans has scores of hedgehog-related genes: sequence and expression analysis. Aspöck G, et al. Genome Res, 1999 Oct. PMID 10523520
  3. Comprehensive analysis of gene expression patterns of hedgehog-related genes. Hao L, et al. BMC Genomics, 2006 Oct 31. PMID 17076889, Free PMC Article
  4. Evolution of hedgehog and hedgehog-related genes, their origin from Hog proteins in ancestral eukaryotes and discovery of a novel Hint motif. Bürglin TR. BMC Genomics, 2008 Mar 11. PMID 18334026, Free PMC Article
  5. Meta-Analysis of Caenorhabditis elegans Transcriptomics Implicates Hedgehog-Like Signaling in Host-Microbe Interactions. Zárate-Potes A, et al. Front Microbiol, 2022. PMID 35620104, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
Ground-like domain-containing protein
NP_506238.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    12945075..12946858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073837.5 → NP_506238.1  Ground-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506238.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XUP5
    Conserved Domains (2) summary
    pfam04155
    Location:293 → 364
    Ground-like; Ground-like domain
    pfam15488
    Location:83 → 151
    DUF4645; Domain of unknown function (DUF4645)
Nucleotide Protein
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