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C50B6.3 DUF3452 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 179811, updated on 18-Sep-2024

Summary

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Official Symbol
C50B6.3
Official Full Name
DUF3452 domain-containing protein
Primary source
WormBase:WBGene00008219
Locus tag
CELE_C50B6.3
See related
AllianceGenome:WB:WBGene00008219
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See C50B6.3 in Genome Data Viewer
Location:
chromosome: V
Exon count:
5
Sequence:
Chromosome: V; NC_003283.11 (13313573..13315821)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene DUF4817 domain-containing protein Neighboring gene Tetratricopeptide SHNi-TPR domain-containing protein Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein Neighboring gene Serpentine Receptor, class H

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways. Duchaine TF, et al. Cell, 2006 Jan 27. PMID 16439208
  2. SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans. Robert VJ, et al. Development, 2023 Nov 1. PMID 37818613, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
DUF3452 domain-containing protein
NP_001256498.1
  • Confirmed by transcript evidence
NP_001256499.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    13313573..13315821
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001269570.2 → NP_001256499.1  DUF3452 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256499.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O17689
    Conserved Domains (1) summary
    PRK09537
    Location:366 → 452
    pylS; pyrrolysine--tRNA(Pyl) ligase

  2. NM_001269569.2 → NP_001256498.1  DUF3452 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256498.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L2E3
    Conserved Domains (1) summary
    PRK09537
    Location:368 → 454
    pylS; pyrolysyl-tRNA synthetase; Reviewed
Nucleotide Protein
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