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slc-9B.2 Cation/H+ exchanger domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 180097, updated on 2-Nov-2024

Summary

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Official Symbol
slc-9B.2
Official Full Name
Cation/H+ exchanger domain-containing protein
Primary source
WormBase:WBGene00010214
Locus tag
CELE_F57G8.5
See related
AllianceGenome:WB:WBGene00010214
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable antiporter activity. Predicted to be involved in inorganic cation transmembrane transport. Predicted to be located in membrane. Orthologous to several human genes including SLC9B1 (solute carrier family 9 member B1) and SLC9B2 (solute carrier family 9 member B2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See slc-9B.2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
10
Sequence:
Chromosome: V; NC_003283.11 (16339042..16341536)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene tRNA-Asn Neighboring gene ncRNA Neighboring gene tRNA-Asn Neighboring gene tRNA-Asn Neighboring gene ncRNA Neighboring gene tRNA-Asn

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  2. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in inorganic cation transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in monoatomic cation transport IEA
Inferred from Electronic Annotation
more info
  
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Cation/H+ exchanger domain-containing protein
NP_507130.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    16339042..16341536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_074729.6 → NP_507130.2  Cation/H+ exchanger domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_507130.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XU88
    Conserved Domains (1) summary
    cl01133
    Location:59 → 411
    Na_H_Exchanger; Sodium/hydrogen exchanger family
Nucleotide Protein
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