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ZK1193.2 VWFA domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 180396, updated on 18-Sep-2024

Summary

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Official Symbol
ZK1193.2
Official Full Name
VWFA domain-containing protein
Primary source
WormBase:WBGene00022858
Locus tag
CELE_ZK1193.2
See related
AllianceGenome:WB:WBGene00022858
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See ZK1193.2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
32
Sequence:
Chromosome: X; NC_003284.9 (406459..425635, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene F-box domain-containing protein Neighboring gene Late nodulin Neighboring gene tRNA-Gln Neighboring gene Cuticle collagen 19 Neighboring gene Homeobox protein dve-1 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of novel nicotinic receptor-associated proteins in Caenorhabditis elegans. Gottschalk A, et al. EMBO J, 2005 Jul 20. PMID 15990870, Free PMC Article
  2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
VWFA domain-containing protein
NP_001338858.1
  • Confirmed by transcript evidence
NP_001380217.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    406459..425635 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001351873.3 → NP_001338858.1  VWFA domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1X7RBP4
    Conserved Domains (3) summary
    smart00034
    Location:1133 → 1264
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00327
    Location:1936 → 2120
    VWA; von Willebrand factor (vWF) type A domain
    smart00604
    Location:1765 → 1895
    MD; MD domain

  2. NM_001392714.1 → NP_001380217.1  VWFA domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1X7RBR0
    Conserved Domains (1) summary
    smart00327
    Location:3 → 187
    VWA; von Willebrand factor (vWF) type A domain
Nucleotide Protein
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