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abu-12 Activated in Blocked Unfolded protein response [ Caenorhabditis elegans ]

Gene ID: 180399, updated on 28-Oct-2024

Summary

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Official Symbol
abu-12
Official Full Name
Activated in Blocked Unfolded protein response
Primary source
WormBase:WBGene00004127
Locus tag
CELE_F52D1.3
See related
AllianceGenome:WB:WBGene00004127
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See abu-12 in Genome Data Viewer
Location:
chromosome: X
Exon count:
13
Sequence:
Chromosome: X; NC_003284.9 (450446..457610, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Gag-pol polyprotein Neighboring gene Glycoside hydrolase family 31 N-terminal domain-containing protein Neighboring gene Protein quiver

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Neuronal GPCR controls innate immunity by regulating noncanonical unfolded protein response genes. Sun J, et al. Science, 2011 May 6. PMID 21474712, Free PMC Article
  2. Gene CATCHR--gene cloning and tagging for Caenorhabditis elegans using yeast homologous recombination: a novel approach for the analysis of gene expression. Sassi HE, et al. Nucleic Acids Res, 2005 Oct 27. PMID 16254074, Free PMC Article
  3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Activated in Blocked Unfolded protein response
NP_001368596.1
  • Product from WormBase gene class abu;
    Confirmed by transcript evidence
NP_001368597.1
  • Product from WormBase gene class abu;
    Confirmed by transcript evidence
NP_508104.2
  • Product from WormBase gene class abu;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    450446..457610 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_075703.5 → NP_508104.2  Activated in Blocked Unfolded protein response [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508104.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O17351

  2. NM_001380890.1 → NP_001368597.1  Activated in Blocked Unfolded protein response [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A131MD32

  3. NM_001380891.1 → NP_001368596.1  Activated in Blocked Unfolded protein response [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A131MC08
Nucleotide Protein
Heading Accession and Version

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