cdo-1 Cysteine dioxygenase 1 [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: cdo-1
Official Full Name: Cysteine dioxygenase 1
Primary source: WormBase:WBGene00018986
Locus tag: CELE_F56F10.3
See related: AllianceGenome:WB:WBGene00018986
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable cysteine dioxygenase activity and ferrous iron binding activity. Predicted to be involved in L-cysteine catabolic process. Is expressed in hypodermis; intestine; and tail. Orthologous to human CDO1 (cysteine dioxygenase type 1). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See cdo-1 in Genome Data Viewer

Location:: chromosome: X

Exon count:: 5

Sequence:: Chromosome: X; NC_003284.9 (862267..863578, complement)

Chromosome X - NC_003284.9 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

F56F10.3 (e-PCR)
- UniSTS:305837

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables cysteine dioxygenase activity	IBA Inferred from Biological aspect of Ancestor more info
enables cysteine dioxygenase activity	IEA Inferred from Electronic Annotation more info
enables dioxygenase activity	IEA Inferred from Electronic Annotation more info
enables ferrous iron binding	IBA Inferred from Biological aspect of Ancestor more info
enables iron ion binding	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in L-cysteine catabolic process	IBA Inferred from Biological aspect of Ancestor more info
involved_in taurine biosynthetic process	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: Cysteine dioxygenase 1

NP_508168.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003284.9 Reference assembly

Range

862267..863578 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_075767.7 → NP_508168.1 Cysteine dioxygenase 1 [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_508168.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q20893

Conserved Domains (1) summary

pfam05995
Location:3 → 162

CDO_I; Cysteine dioxygenase type I