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pifk-1 Phosphatidylinositol 4-kinase beta [ Caenorhabditis elegans ]

Gene ID: 180443, updated on 4-Jan-2025

Summary

Official Symbol
pifk-1
Official Full Name
Phosphatidylinositol 4-kinase beta
Primary source
WormBase:WBGene00018076
Locus tag
CELE_F35H12.4
See related
AllianceGenome:WB:WBGene00018076
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable 1-phosphatidylinositol 4-kinase activity. Involved in regulation of basement membrane organization. Predicted to be located in mitochondrial outer membrane and rough endoplasmic reticulum membrane. Predicted to be active in cytoplasm and membrane. Is expressed in several structures, including head; intestine; pharynx; reproductive system; and seam cell. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 87. Orthologous to human PI4KB (phosphatidylinositol 4-kinase beta). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See pifk-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
12
Sequence:
Chromosome: X; NC_003284.9 (920197..924511, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Presenilin sel-12 Neighboring gene Uncharacterized protein Neighboring gene Rab GTPase-activating protein tbc-11 Neighboring gene Schwannomin interacting protein 1 C-terminal domain-containing protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables 1-phosphatidylinositol 4-kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in phosphatidylinositol phosphate biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
involved_in phosphatidylinositol-mediated signaling IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of basement membrane organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 
located_in rough endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Phosphatidylinositol 4-kinase beta
NP_508177.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    920197..924511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_075776.8NP_508177.2  Phosphatidylinositol 4-kinase beta [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508177.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20077
    Conserved Domains (1) summary
    cd05168
    Location:367666
    PI4Kc_III_beta; Catalytic domain of Type III Phosphoinositide 4-kinase beta