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H42K12.3 Apple domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 180474, updated on 4-Jan-2025

Summary

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Official Symbol
H42K12.3
Official Full Name
Apple domain-containing protein
Primary source
WormBase:WBGene00019272
Locus tag
CELE_H42K12.3
See related
AllianceGenome:WB:WBGene00019272
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in anatomical structure morphogenesis. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See H42K12.3 in Genome Data Viewer
Location:
chromosome: X
Exon count:
10
Sequence:
Chromosome: X; NC_003284.9 (1311605..1316640)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene BTB domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 3-phosphoinositide-dependent protein kinase 1 Neighboring gene CX domain-containing protein Neighboring gene Transthyretin-like family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Apple domain-containing protein
NP_508240.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    1311605..1316640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_075839.9 → NP_508240.1  Apple domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508240.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O17347
    Conserved Domains (3) summary
    smart00209
    Location:385 → 424
    TSP1; Thrombospondin type 1 repeats
    smart00473
    Location:28 → 113
    PAN_AP; divergent subfamily of APPLE domains
    pfam00024
    Location:127 → 203
    PAN_1; PAN domain
Nucleotide Protein
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