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F14H12.3 Thrombospondin type 1 domain protein [ Caenorhabditis elegans ]

Gene ID: 180709, updated on 18-Sep-2024

Summary

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Official Symbol
F14H12.3
Official Full Name
Thrombospondin type 1 domain protein
Primary source
WormBase:WBGene00017471
Locus tag
CELE_F14H12.3
See related
AllianceGenome:WB:WBGene00017471
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See F14H12.3 in Genome Data Viewer
Location:
chromosome: X
Exon count:
6
Sequence:
Chromosome: X; NC_003284.9 (4344215..4345654)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Serine/threonine-protein kinase cst-1 37kDa subunit Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Regulation of tissue-specific and extracellular matrix-related genes by a class I histone deacetylase. Whetstine JR, et al. Mol Cell, 2005 May 13. PMID 15893731
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Thrombospondin type 1 domain protein
NP_508745.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    4344215..4345654
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_076344.5 → NP_508745.1  Thrombospondin type 1 domain protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508745.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q966K7
    Conserved Domains (2) summary
    smart00209
    Location:91 → 139
    TSP1; Thrombospondin type 1 repeats
    cl15278
    Location:39 → 86
    TSP_1; Thrombospondin type 1 domain
Nucleotide Protein
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