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nhx-5 Sodium/hydrogen exchanger [ Caenorhabditis elegans ]

Gene ID: 181258, updated on 9-Dec-2024

Summary

Official Symbol
nhx-5
Official Full Name
Sodium/hydrogen exchanger
Primary source
WormBase:WBGene00003733
Locus tag
CELE_F57C7.2
See related
AllianceGenome:WB:WBGene00003733
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable potassium:proton antiporter activity and sodium:proton antiporter activity. Predicted to be involved in potassium ion transmembrane transport; regulation of intracellular pH; and sodium ion import across plasma membrane. Predicted to be located in recycling endosome membrane. Predicted to be active in plasma membrane and recycling endosome. Is expressed in several structures, including HSN; excretory cell; ganglia; ventral nerve cord; and vulC. Human ortholog(s) of this gene implicated in Christianson syndrome; X-linked intellectual developmental disorder 108; and autistic disorder. Orthologous to several human genes including SLC9A9 (solute carrier family 9 member A9). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See nhx-5 in Genome Data Viewer
Location:
chromosome: X
Exon count:
19
Sequence:
Chromosome: X; NC_003284.9 (10576960..10581034)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene DM13 domain-containing protein Neighboring gene Bromo domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene PKD/REJ-like domain-containing protein Neighboring gene ncRNA Neighboring gene Syndecan;putative syndecan Neighboring gene ncRNA

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 
enables potassium:proton antiporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables sodium:proton antiporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables sodium:proton antiporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in monoatomic cation transport IEA
Inferred from Electronic Annotation
more info
 
involved_in potassium ion transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of intracellular pH IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of intracellular pH IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of pH IEA
Inferred from Electronic Annotation
more info
 
involved_in sodium ion import across plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in sodium ion transport IEA
Inferred from Electronic Annotation
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in recycling endosome IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in recycling endosome membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Sodium/hydrogen exchanger
NP_001024720.1
  • Confirmed by transcript evidence
NP_001359642.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    10576960..10581034
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001373485.3NP_001359642.1  Sodium/hydrogen exchanger [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5ECW8
    Conserved Domains (1) summary
    TIGR00840
    Location:157469
    b_cpa1; sodium/hydrogen exchanger 3
  2. NM_001029549.5NP_001024720.1  Sodium/hydrogen exchanger [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001024720.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5ED88
    Conserved Domains (1) summary
    COG0025
    Location:152470
    NhaP; NhaP-type Na+/H+ or K+/H+ antiporter [Inorganic ion transport and metabolism]