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F08G12.1 Rab-like protein 6 [ Caenorhabditis elegans ]

Gene ID: 181320, updated on 9-Dec-2024

Summary

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Official Symbol
F08G12.1
Official Full Name
Rab-like protein 6
Primary source
WormBase:WBGene00008585
Locus tag
CELE_F08G12.1
See related
AllianceGenome:WB:WBGene00008585
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable GTP binding activity. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including alimentary muscle; body wall musculature; hypodermis; nervous system; and reproductive system. Orthologous to human RABL6 (RAB, member RAS oncogene family like 6). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See F08G12.1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
14
Sequence:
Chromosome: X; NC_003284.9 (11302015..11305873, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Innexin-2 Neighboring gene WD_REPEATS_REGION domain-containing protein Neighboring gene RasGEF domain protein Neighboring gene von Hippel-Lindau tumor suppressor homolog Neighboring gene RING-type domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Rab-like protein 6
NP_509888.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    11302015..11305873 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077487.5 → NP_509888.1  Rab-like protein 6 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_509888.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q19210
    Conserved Domains (1) summary
    cl21455
    Location:44 → 193
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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