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wrt-9 WaRThog (hedgehog-like family) [ Caenorhabditis elegans ]

Gene ID: 181931, updated on 4-Jan-2025

Summary

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Official Symbol
wrt-9
Official Full Name
WaRThog (hedgehog-like family)
Primary source
WormBase:WBGene00006955
Locus tag
CELE_B0344.2
See related
AllianceGenome:WB:WBGene00006955
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in extracellular matrix. Is expressed in hypodermis. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See wrt-9 in Genome Data Viewer
Location:
chromosome: X
Exon count:
11
Sequence:
Chromosome: X; NC_003284.9 (1576637..1591320)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene VWFA domain-containing protein Neighboring gene VWFA domain-containing protein Neighboring gene Peptidase_M10_C domain-containing protein Neighboring gene tRNA-Ile Neighboring gene tRNA-Ile Neighboring gene tRNA-Ile Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Serine-rich adhesin for platelets;Serine/arginine repetitive matrix protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Caenorhabditis elegans has scores of hedgehog-related genes: sequence and expression analysis. Aspöck G, et al. Genome Res, 1999 Oct. PMID 10523520
  2. Comprehensive analysis of gene expression patterns of hedgehog-related genes. Hao L, et al. BMC Genomics, 2006 Oct 31. PMID 17076889, Free PMC Article
  3. The function and expansion of the Patched- and Hedgehog-related homologs in C. elegans. Zugasti O, et al. Genome Res, 2005 Oct. PMID 16204193, Free PMC Article
  4. Evolution of hedgehog and hedgehog-related genes, their origin from Hog proteins in ancestral eukaryotes and discovery of a novel Hint motif. Bürglin TR. BMC Genomics, 2008 Mar 11. PMID 18334026, Free PMC Article
  5. Meta-Analysis of Caenorhabditis elegans Transcriptomics Implicates Hedgehog-Like Signaling in Host-Microbe Interactions. Zárate-Potes A, et al. Front Microbiol, 2022. PMID 35620104, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
WaRThog (hedgehog-like family)
NP_508298.2
  • Product from WormBase gene class wrt;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    1576637..1591320
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_075897.6 → NP_508298.2  WaRThog (hedgehog-like family) [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508298.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O61737
    Conserved Domains (1) summary
    PHA03247
    Location:299 → 400
    PHA03247; large tegument protein UL36; Provisional
Nucleotide Protein
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