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bath-15 BTB and MATH domain-containing protein 15;BTB domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 182393, updated on 4-Jan-2025

Summary

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Official Symbol
bath-15
Official Full Name
BTB and MATH domain-containing protein 15;BTB domain-containing protein
Primary source
WormBase:WBGene00015590
Locus tag
CELE_C08C3.2
See related
AllianceGenome:WB:WBGene00015590
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in protein ubiquitination. Is expressed in arcade cell; intestine; pharyngeal-intestinal valve; pharynx; and rectal gland cell. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See bath-15 in Genome Data Viewer
Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003281.10 (7774677..7776033, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene RING-type domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Homeobox protein mab-5 Neighboring gene Cytokinesis defective protein 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A unified mode of epigenetic gene silencing: RNA meets polycomb group proteins. Sun Y, et al. RNA Biol, 2005 Jan. PMID 17132931
  2. O-GlcNAcylation confers protection against Staphylococcus aureus infection in Caenorhabditis elegans through ubiquitination. Vigneshwari L, et al. RSC Adv, 2018 Jun 21. PMID 35540126, Free PMC Article
  3. BTB proteins are substrate-specific adaptors in an SCF-like modular ubiquitin ligase containing CUL-3. Xu L, et al. Nature, 2003 Sep 18. PMID 13679922
  4. Functional importance of an inverted formin C-terminal tail at morphologically dynamic epithelial junctions. Hegsted A, et al. Cytoskeleton (Hoboken), 2019 Apr. PMID 31215743, Free PMC Article
  5. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
BTB and MATH domain-containing protein 15;BTB domain-containing protein
NP_001348656.1
  • Confirmed by transcript evidence
NP_498694.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    7774677..7776033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001361734.4 → NP_001348656.1  BTB domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34324
    UniProtKB/TrEMBL
    A0A2K5ATM3
    Conserved Domains (2) summary
    pfam00917
    Location:14 → 127
    MATH; MATH domain
    pfam00651
    Location:141 → 245
    BTB; BTB/POZ domain

  2. NM_066293.8 → NP_498694.2  BTB and MATH domain-containing protein 15 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_498694.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34324
    Conserved Domains (3) summary
    smart00225
    Location:148 → 243
    BTB; Broad-Complex, Tramtrack and Bric a brac
    pfam00651
    Location:139 → 240
    BTB; BTB/POZ domain
    pfam00917
    Location:14 → 125
    MATH; MATH domain
Nucleotide Protein
Heading Accession and Version

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