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C16A11.5 FRIGIDA-like protein;PX domain-containing protein;RING-type domain-containing protein;Uncharacterized protein;Z1 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 182650, updated on 4-Jan-2025

Summary

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Official Symbol
C16A11.5
Official Full Name
FRIGIDA-like protein;PX domain-containing protein;RING-type domain-containing protein;Uncharacterized protein;Z1 domain-containing protein
Primary source
WormBase:WBGene00015818
Locus tag
CELE_C16A11.5
See related
AllianceGenome:WB:WBGene00015818
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in innate immune response. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See C16A11.5 in Genome Data Viewer
Location:
chromosome: II
Exon count:
12
Sequence:
Chromosome: II; NC_003280.10 (4223305..4226338)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene UNC93-like protein MFSD11 Neighboring gene UNC93-like protein MFSD11 Neighboring gene SPK domain-containing protein Neighboring gene SPK domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in innate immune response IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
FRIGIDA-like protein;PX domain-containing protein;RING-type domain-containing protein;Uncharacterized protein;Z1 domain-containing protein
NP_001338808.1
  • Confirmed by transcript evidence
NP_001338811.1
  • Confirmed by transcript evidence
NP_001368647.1
  • Confirmed by transcript evidence
NP_001370971.1
  • Confirmed by transcript evidence
NP_494743.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    4223305..4226338
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001351903.3 → NP_001338808.1  PX domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1X7RC39
    Conserved Domains (1) summary
    cl25732
    Location:206 → 410
    SMC_N; RecF/RecN/SMC N terminal domain

  2. NM_062342.6 → NP_494743.3  FRIGIDA-like protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1X7RC32
    Conserved Domains (1) summary
    cl25732
    Location:241 → 444
    SMC_N; RecF/RecN/SMC N terminal domain

  3. NM_001351900.3 → NP_001338811.1  LOW QUALITY PROTEIN: RING-type domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1X7RBK7
    Conserved Domains (1) summary
    cl25732
    Location:414 → 617
    SMC_N; RecF/RecN/SMC N terminal domain

  4. NM_001383817.2 → NP_001370971.1  Z1 domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1X7RBQ2

  5. NM_001381386.1 → NP_001368647.1  Uncharacterized protein CELE_C16A11.5 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1X7RBJ4
Nucleotide Protein
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