C23G10.2 RutC family protein C23G10.2 [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: C23G10.2
Official Full Name: RutC family protein C23G10.2
Primary source: WormBase:WBGene00016011
Locus tag: CELE_C23G10.2
See related: AllianceGenome:WB:WBGene00016011
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable deaminase activity. Predicted to be involved in mRNA catabolic process and negative regulation of translation. Predicted to be active in cytosol and mitochondrion. Orthologous to human RIDA (reactive intermediate imine deaminase A homolog). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See C23G10.2 in Genome Data Viewer

Location:: chromosome: III

Exon count:: 6

Sequence:: Chromosome: III; NC_003281.10 (6208064..6209140)

Chromosome III - NC_003281.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

C23G10.3 (e-PCR)
- UniSTS:306971

C23G10.2 (e-PCR)
- UniSTS:320465

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables deaminase activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in mRNA catabolic process	IBA Inferred from Biological aspect of Ancestor more info
involved_in negative regulation of translation	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytosol	IBA Inferred from Biological aspect of Ancestor more info
is_active_in mitochondrion	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: RutC family protein C23G10.2

NP_001021179.1

Confirmed by transcript evidence

NP_741177.2

Confirmed by transcript evidence

NP_741178.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003281.10 Reference assembly

Range

6208064..6209140

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_171873.6 → NP_741178.1 RutC family protein C23G10.2 [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_741178.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q10121

Conserved Domains (1) summary

TIGR00004
Location:14 → 135

TIGR00004; reactive intermediate/imine deaminase
NM_171154.8 → NP_741177.2 RutC family protein C23G10.2 [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_741177.2

Status: REVIEWED

UniProtKB/Swiss-Prot

Q10121, Q5NV58, Q5NV59, Q8MQC9

Conserved Domains (1) summary

TIGR00004
Location:41 → 162

TIGR00004; reactive intermediate/imine deaminase
NM_001026008.6 → NP_001021179.1 RutC family protein C23G10.2 [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_001021179.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q10121

Conserved Domains (1) summary

TIGR00004
Location:7 → 128

TIGR00004; reactive intermediate/imine deaminase