luc-7L3 Luc7-like protein 3 [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: luc-7L3
Official Full Name: Luc7-like protein 3
Primary source: WormBase:WBGene00016811
Locus tag: CELE_C50D2.8
See related: AllianceGenome:WB:WBGene00016811
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable mRNA binding activity. Predicted to be involved in mRNA splice site recognition. Predicted to be part of U1 snRNP. Orthologous to human LUC7L3 (LUC7 like 3 pre-mRNA splicing factor). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See luc-7L3 in Genome Data Viewer

Location:: chromosome: II

Exon count:: 7

Sequence:: Chromosome: II; NC_003280.10 (95669..97944, complement)

Chromosome II - NC_003280.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

C50D2.8 (e-PCR)
- UniSTS:309367

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables mRNA binding	IBA Inferred from Biological aspect of Ancestor more info
enables mRNA binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in mRNA splice site recognition	IBA Inferred from Biological aspect of Ancestor more info
involved_in mRNA splice site recognition	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of U1 snRNP	IBA Inferred from Biological aspect of Ancestor more info
part_of U1 snRNP	IEA Inferred from Electronic Annotation more info
part_of U2-type prespliceosome	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Luc7-like protein 3

NP_001367546.1

Confirmed by transcript evidence

NP_001368513.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003280.10 Reference assembly

Range

95669..97944 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001381286.1 → NP_001367546.1 Luc7-like protein 3 [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

Q8ITY5

Conserved Domains (1) summary

pfam03194
Location:5 → 260

LUC7; LUC7 N_terminus
NM_001381287.1 → NP_001368513.1 Luc7-like protein 3 [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A0K3AUJ4

Conserved Domains (1) summary

pfam03194
Location:1 → 212

LUC7; LUC7 N_terminus