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clc-31 Claudin family protein [ Caenorhabditis elegans ]

Gene ID: 183923, updated on 2-Nov-2024

Summary

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Official Symbol
clc-31
Official Full Name
Claudin family protein
Primary source
WormBase:WBGene00017036
Locus tag
CELE_D1069.1
See related
AllianceGenome:WB:WBGene00017036
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See clc-31 in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_003280.10 (340524..341803)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Calponin-homology (CH) domain-containing protein;Transgelin Neighboring gene COP9 signalosome complex subunit 3;Hyccin Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene SSD domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Claudin family protein
NP_493714.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    340524..341803
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_061313.4 → NP_493714.2  Claudin family protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    O44789
    Conserved Domains (1) summary
    pfam06653
    Location:68 → 187
    Claudin_3; Tight junction protein, Claudin-like
Nucleotide Protein
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