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F10B5.2 Protein AAR2 homolog [ Caenorhabditis elegans ]

Gene ID: 184284, updated on 4-Jan-2025

Summary

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Official Symbol
F10B5.2
Official Full Name
Protein AAR2 homolog
Primary source
WormBase:WBGene00008639
Locus tag
CELE_F10B5.2
See related
AllianceGenome:WB:WBGene00008639
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in spliceosomal tri-snRNP complex assembly. Orthologous to human AAR2 (AAR2 splicing factor). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See F10B5.2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (8144762..8147236)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Transitional endoplasmic reticulum ATPase homolog 2 Neighboring gene Integrator complex subunit 11 Neighboring gene Large ribosomal subunit protein uL16 Neighboring gene BTB domain-containing protein Neighboring gene Tubby protein homolog 1 Neighboring gene Transmembrane protein 138

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in spliceosomal tri-snRNP complex assembly IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Protein AAR2 homolog
NP_495708.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    8144762..8147236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063307.7 → NP_495708.1  Protein AAR2 homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495708.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q09305
    Conserved Domains (3) summary
    cd13777
    Location:18 → 140
    Aar2_N; N-terminal domain of Aar2, a U5 small nuclear ribonucleoprotein particle assembly factor
    cd13778
    Location:203 → 350
    Aar2_C; C-terminal domain of Aar2, a U5 small nuclear ribonucleoprotein particle assembly factor
    pfam05282
    Location:16 → 355
    AAR2; AAR2 protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q09305.1

Gene LinkOut

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