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F16F9.3 EF-hand domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 184574, updated on 4-Jan-2025

Summary

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Official Symbol
F16F9.3
Official Full Name
EF-hand domain-containing protein
Primary source
WormBase:WBGene00017514
Locus tag
CELE_F16F9.3
See related
AllianceGenome:WB:WBGene00017514
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in amphid sheath cell and phasmid sheath cell. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See F16F9.3 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Sequence:
Chromosome: X; NC_003284.9 (8457614..8459848)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA Neighboring gene Alpha/beta hydrolase fold-3 domain-containing protein Neighboring gene ncRNA Neighboring gene Degenerin mec-10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
EF-hand domain-containing protein
NP_001123133.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    8457614..8459848
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001129661.5 → NP_001123133.1  EF-hand domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001123133.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8WFM7
    Conserved Domains (1) summary
    cl08302
    Location:84 → 135
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Nucleotide Protein
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