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F26F2.1 Trichohyalin-like [ Caenorhabditis elegans ]

Gene ID: 184982, updated on 9-Dec-2024

Summary

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Official Symbol
F26F2.1
Official Full Name
Trichohyalin-like
Primary source
WormBase:WBGene00009166
Locus tag
CELE_F26F2.1
See related
AllianceGenome:WB:WBGene00009166
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in innate immune response. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See F26F2.1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
13
Sequence:
Chromosome: V; NC_003283.11 (20559162..20561895, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene AntiBacterial Factor related Neighboring gene Transcription termination factor Rho Neighboring gene DUF305 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Ubiquitin-mediated response to microsporidia and virus infection in C. elegans. Bakowski MA, et al. PLoS Pathog, 2014 Jun. PMID 24945527, Free PMC Article
  2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in innate immune response IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Trichohyalin-like
NP_507966.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    20559162..20561895 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_075565.5 → NP_507966.2  Trichohyalin-like [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_507966.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5ECB0
    Conserved Domains (1) summary
    COG5271
    Location:8 → 367
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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