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F36H1.3 Tyrosine-protein phosphatase [ Caenorhabditis elegans ]

Gene ID: 185379, updated on 9-Dec-2024

Summary

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Official Symbol
F36H1.3
Official Full Name
Tyrosine-protein phosphatase
Primary source
WormBase:WBGene00009492
Locus tag
CELE_F36H1.3
See related
AllianceGenome:WB:WBGene00009492
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable protein tyrosine phosphatase activity. Predicted to be involved in protein dephosphorylation. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See F36H1.3 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
10
Sequence:
Chromosome: IV; NC_003282.8 (11050128..11052501)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene KAP NTPase domain-containing protein Neighboring gene ncRNA Neighboring gene Secreted protein Neighboring gene Dynein light chain Neighboring gene EGF-like domain-containing protein;Protein lin-3 Neighboring gene Transthyretin-like protein 16

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Tyrosine-protein phosphatase
NP_502058.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    11050128..11052501
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069657.4 → NP_502058.3  Tyrosine-protein phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502058.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20108
    Conserved Domains (2) summary
    smart00194
    Location:122 → 375
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:152 → 375
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
Nucleotide Protein
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