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grl-27 Ground-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 185516, updated on 2-Nov-2024

Summary

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Official Symbol
grl-27
Official Full Name
Ground-like domain-containing protein
Primary source
WormBase:WBGene00001736
Locus tag
CELE_F40C5.3
See related
AllianceGenome:WB:WBGene00001736
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in arcade cell; head; and seam cell. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See grl-27 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (3575055..3575859, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene UBC core domain-containing protein Neighboring gene Transposase Neighboring gene Alpha-1,4 glucan phosphorylase Neighboring gene tRNA-Pro Neighboring gene tRNA-Pro

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential gene expression of Caenorhabditis elegans grown on unmethylated sterols or 4alpha-methylsterols. Merris M, et al. J Lipid Res, 2007 May. PMID 17277379
  2. Comprehensive analysis of gene expression patterns of hedgehog-related genes. Hao L, et al. BMC Genomics, 2006 Oct 31. PMID 17076889, Free PMC Article
  3. Evolution of hedgehog and hedgehog-related genes, their origin from Hog proteins in ancestral eukaryotes and discovery of a novel Hint motif. Bürglin TR. BMC Genomics, 2008 Mar 11. PMID 18334026, Free PMC Article
  4. Transcriptome analyses describe the consequences of persistent HIF-1 over-activation in Caenorhabditis elegans. Feng D, et al. PLoS One, 2024. PMID 38517909, Free PMC Article
  5. Meta-Analysis of Caenorhabditis elegans Transcriptomics Implicates Hedgehog-Like Signaling in Host-Microbe Interactions. Zárate-Potes A, et al. Front Microbiol, 2022. PMID 35620104, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Ground-like domain-containing protein
NP_504006.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    3575055..3575859 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071605.6 → NP_504006.1  Ground-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504006.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9N5U2
    Conserved Domains (1) summary
    pfam04155
    Location:66 → 137
    Ground-like; Ground-like domain
Nucleotide Protein
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