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lips-1 Lipase [ Caenorhabditis elegans ]

Gene ID: 185800, updated on 9-Dec-2024

Summary

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Official Symbol
lips-1
Official Full Name
Lipase
Primary source
WormBase:WBGene00009727
Locus tag
CELE_F45E6.4
See related
AllianceGenome:WB:WBGene00009727
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable lipase activity. Predicted to be involved in lipid catabolic process. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See lips-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
8
Sequence:
Chromosome: X; NC_003284.9 (12492767..12496041)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Transcription factor atf-6 homolog Neighboring gene Rab-GAP TBC domain-containing protein Neighboring gene ncRNA Neighboring gene SKN-1 Dependent Zygotic transcript Neighboring gene Suppressor of Constitutive Dauer formation Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics and functional study of lipid metabolic genes in Caenorhabditis elegans. Zhang Y, et al. BMC Genomics, 2013 Mar 12. PMID 23496871, Free PMC Article
  2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables lipase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in lipid catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Lipase
NP_510096.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    12492767..12496041
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077695.5 → NP_510096.1  Lipase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_510096.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20437
    Conserved Domains (1) summary
    pfam01674
    Location:67 → 316
    Lipase_2; Lipase (class 2)
Nucleotide Protein
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