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srt-17 7TM_GPCR_Srx domain-containing protein;Serpentine Receptor, class T [ Caenorhabditis elegans ]

Gene ID: 185994, updated on 4-Jan-2025

Summary

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Official Symbol
srt-17
Official Full Name
7TM_GPCR_Srx domain-containing protein;Serpentine Receptor, class T
Primary source
WormBase:WBGene00018617
Locus tag
CELE_F48G7.6
See related
AllianceGenome:WB:WBGene00018617
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See srt-17 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (623298..625022, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene F-box domain-containing protein Neighboring gene ShKT domain-containing protein Neighboring gene ShKT domain-containing protein Neighboring gene ShKT domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
7TM_GPCR_Srx domain-containing protein;Serpentine Receptor, class T
NP_001300109.1
  • Partially confirmed by transcript evidence
NP_001300110.1
  • Partially confirmed by transcript evidence
NP_001300111.1
  • Partially confirmed by transcript evidence
NP_001300112.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    623298..625022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001313181.1 → NP_001300110.1  Serpentine Receptor, class T [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3ASH7
    Conserved Domains (1) summary
    pfam10321
    Location:16 → 242
    7TM_GPCR_Srt; Serpentine type 7TM GPCR chemoreceptor Srt

  2. NM_001313180.1 → NP_001300109.1  Serpentine Receptor, class T [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AXT4
    Conserved Domains (1) summary
    pfam10321
    Location:16 → 318
    7TM_GPCR_Srt; Serpentine type 7TM GPCR chemoreceptor Srt

  3. NM_001313182.1 → NP_001300111.1  7TM_GPCR_Srx domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AUW5
    Conserved Domains (1) summary
    pfam10321
    Location:1 → 159
    7TM_GPCR_Srt; Serpentine type 7TM GPCR chemoreceptor Srt

  4. NM_001313183.1 → NP_001300112.1  Serpentine Receptor, class T [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AS13
    Conserved Domains (1) summary
    pfam10321
    Location:1 → 235
    7TM_GPCR_Srt; Serpentine type 7TM GPCR chemoreceptor Srt
Nucleotide Protein
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