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K07A1.10 Large ribosomal subunit protein mL64 [ Caenorhabditis elegans ]

Gene ID: 187083, updated on 9-Dec-2024

Summary

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Official Symbol
K07A1.10
Official Full Name
Large ribosomal subunit protein mL64
Primary source
WormBase:WBGene00010616
Locus tag
CELE_K07A1.10
See related
AllianceGenome:WB:WBGene00010616
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in nucleus and ribosome. Predicted to be part of ribonucleoprotein complex. Predicted to be active in mitochondrion. Orthologous to human GADD45GIP1 (GADD45G interacting protein 1). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See K07A1.10 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003279.8 (9615192..9616333, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Sm domain-containing protein Neighboring gene L-type lectin-like domain-containing protein Neighboring gene ATE_N domain-containing protein;Arginyl-tRNA--protein transferase 1 Neighboring gene putative histone-binding protein rba-1 Neighboring gene putative histone-binding protein lin-53

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in cell cycle IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Large ribosomal subunit protein mL64
NP_492550.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    9615192..9616333 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_060149.6 → NP_492550.3  Large ribosomal subunit protein mL64 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492550.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    P90915
    Conserved Domains (1) summary
    pfam10147
    Location:8 → 203
    CR6_interact; Growth arrest and DNA-damage-inducible proteins-interacting protein 1
Nucleotide Protein
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