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ttr-32 Transthyretin-like family protein [ Caenorhabditis elegans ]

Gene ID: 187854, updated on 2-Nov-2024

Summary

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Official Symbol
ttr-32
Official Full Name
Transthyretin-like family protein
Primary source
WormBase:WBGene00020047
Locus tag
CELE_R13A5.3
See related
AllianceGenome:WB:WBGene00020047
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in cell surface and extracellular region. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ttr-32 in Genome Data Viewer
Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003281.10 (7566411..7567490)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Homeobox protein ceh-13 Neighboring gene Ligand-Gated ion Channel Neighboring gene Transthyretin-like family protein Neighboring gene FBA_2 domain-containing protein Neighboring gene Large ribosomal subunit protein uL6 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of 1088 new transposon insertions of Caenorhabditis elegans: a pilot study toward large-scale screens. Martin E, et al. Genetics, 2002 Sep. PMID 12242258, Free PMC Article
  2. Analysis of protein domain families in Caenorhabditis elegans. Sonnhammer EL, et al. Genomics, 1997 Dec 1. PMID 9417907
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
  
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Transthyretin-like family protein
NP_498658.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    7566411..7567490
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_066257.2 → NP_498658.1  Transthyretin-like family protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_498658.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95Y92
    Conserved Domains (1) summary
    pfam01060
    Location:26 → 103
    TTR-52; Transthyretin-like family
Nucleotide Protein
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