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srab-16 Serpentine Receptor, class AB (Class A-like);Transposase [ Caenorhabditis elegans ]

Gene ID: 187865, updated on 4-Jan-2025

Summary

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Official Symbol
srab-16
Official Full Name
Serpentine Receptor, class AB (Class A-like);Transposase
Primary source
WormBase:WBGene00020060
Locus tag
CELE_R13D11.6
See related
AllianceGenome:WB:WBGene00020060
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Located in non-motile cilium. Is expressed in nervous system. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See srab-16 in Genome Data Viewer
Location:
chromosome: V
Exon count:
7
Sequence:
Chromosome: V; NC_003283.11 (782732..784763)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class BC (Class B-like) Neighboring gene Serpentine Receptor, class BC (Class B-like) Neighboring gene pseudo Neighboring gene Nuclear Hormone Receptor family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Diverse cell type-specific mechanisms localize G protein-coupled receptors to Caenorhabditis elegans sensory cilia. Brear AG, et al. Genetics, 2014 Jun. PMID 24646679, Free PMC Article
  2. Identification of a nematode chemosensory gene family. Chen N, et al. Proc Natl Acad Sci U S A, 2005 Jan 4. PMID 15618405, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in non-motile cilium IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Serpentine Receptor, class AB (Class A-like);Transposase
NP_001300180.1
  • Partially confirmed by transcript evidence
NP_503325.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    782732..784763
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_070924.3 → NP_503325.2  Serpentine Receptor, class AB (Class A-like) [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503325.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O17010
    Conserved Domains (1) summary
    pfam10292
    Location:2 → 324
    7TM_GPCR_Srab; Serpentine type 7TM GPCR receptor class ab chemoreceptor

  2. NM_001313251.1 → NP_001300180.1  Transposase [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3ASU2
    Conserved Domains (1) summary
    cl11607
    Location:1 → 40
    7TM_GPCR_Srab; Serpentine type 7TM GPCR receptor class ab chemoreceptor
Nucleotide Protein
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