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psf-1 putative DNA replication complex GINS protein PSF1 [ Caenorhabditis elegans ]

Gene ID: 187885, updated on 2-Nov-2024

Summary

Official Symbol
psf-1
Official Full Name
putative DNA replication complex GINS protein PSF1
Primary source
WormBase:WBGene00011275
Locus tag
CELE_R53.6
See related
AllianceGenome:WB:WBGene00011275
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in DNA strand elongation involved in mitotic DNA replication. Predicted to be located in nucleus. Predicted to be part of GINS complex. Human ortholog(s) of this gene implicated in immunodeficiency 55. Orthologous to human GINS1 (GINS complex subunit 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See psf-1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
6
Sequence:
Chromosome: II; NC_003280.10 (9968673..9969630)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Putative ATP synthase subunit f, mitochondrial Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Peroxiredoxin-like 2A Neighboring gene CBS domain-containing protein Neighboring gene AMIN domain-containing protein

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 
involved_in DNA strand elongation involved in mitotic DNA replication IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of GINS complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of GINS complex IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
putative DNA replication complex GINS protein PSF1
NP_496153.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    9968673..9969630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063752.6NP_496153.2  putative DNA replication complex GINS protein PSF1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496153.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q22019
    Conserved Domains (2) summary
    cd11710
    Location:12137
    GINS_A_psf1; Alpha-helical domain of GINS complex protein Psf1
    COG5230
    Location:18200
    COG5230; Uncharacterized conserved protein [Function unknown]