U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

pzf-1 Paired zinc finger protein 1 [ Caenorhabditis elegans ]

Gene ID: 188142, updated on 9-Dec-2024

Summary

Official Symbol
pzf-1
Official Full Name
Paired zinc finger protein 1
Primary source
WormBase:WBGene00011505
Locus tag
CELE_T05G11.1
See related
AllianceGenome:WB:WBGene00011505
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Involved in meiotic chromosome segregation and positive regulation of meiotic cell cycle. Predicted to be active in nucleus. Is expressed in gonad. [provided by Alliance of Genome Resources, Dec 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See pzf-1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (15926425..15928425, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene CaDmium Responsive Neighboring gene Nuclear hormone receptor family member nhr-108 Neighboring gene ShKT domain-containing protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Serpentine Receptor, class BC (Class B-like)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in meiotic chromosome segregation IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of meiotic cell cycle IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
Paired zinc finger protein 1
NP_001256688.1
  • Confirmed by transcript evidence
NP_001256689.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    15926425..15928425 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001269759.2NP_001256688.1  Paired zinc finger protein 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256688.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    G5EGG3, G5EGQ2
    Conserved Domains (1) summary
    COG5236
    Location:1362
    COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
  2. NM_001269760.3NP_001256689.1  Paired zinc finger protein 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256689.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EGG3