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sre-28 Serpentine Receptor, class E (Epsilon) [ Caenorhabditis elegans ]

Gene ID: 188216, updated on 4-Jan-2025

Summary

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Official Symbol
sre-28
Official Full Name
Serpentine Receptor, class E (Epsilon)
Primary source
WormBase:WBGene00011570
Locus tag
CELE_T07C12.6
See related
AllianceGenome:WB:WBGene00011570
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Is expressed in head and intestine. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See sre-28 in Genome Data Viewer
Location:
chromosome: V
Exon count:
5
Sequence:
Chromosome: V; NC_003283.11 (9944393..9945895)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene FIP (Fungus-Induced Protein) Related Neighboring gene Neuropeptide-Like Protein Neighboring gene Transthyretin-like protein 46

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Predicting PDZ domain-peptide interactions from primary sequences. Chen JR, et al. Nat Biotechnol, 2008 Sep. PMID 18711339, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class E (Epsilon)
NP_505560.1
  • Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    9944393..9945895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073159.1 → NP_505560.1  Serpentine Receptor, class E (Epsilon) [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_505560.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q22284
    Conserved Domains (1) summary
    pfam03125
    Location:1 → 359
    Sre; C. elegans Sre G protein-coupled chemoreceptor
Nucleotide Protein
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