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lips-5 Lipase [ Caenorhabditis elegans ]

Gene ID: 188437, updated on 9-Dec-2024

Summary

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Official Symbol
lips-5
Official Full Name
Lipase
Primary source
WormBase:WBGene00011725
Locus tag
CELE_T12A7.4
See related
AllianceGenome:WB:WBGene00011725
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable lipase activity. Predicted to be involved in lipid catabolic process. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See lips-5 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
9
Sequence:
Chromosome: IV; NC_003282.8 (11768621..11773742, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene BAR domain-containing protein Neighboring gene EGF-like domain-containing protein Neighboring gene ncRNA Neighboring gene LiPocalin-Related protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics and functional study of lipid metabolic genes in Caenorhabditis elegans. Zhang Y, et al. BMC Genomics, 2013 Mar 12. PMID 23496871, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables lipase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in lipid catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Lipase
NP_001076706.1
  • Confirmed by transcript evidence
NP_001076707.1
  • Confirmed by transcript evidence
NP_001255588.1
  • Confirmed by transcript evidence
NP_001255589.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    11768621..11773742 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001083237.3 → NP_001076706.1  Lipase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001076706.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q067X9
    Conserved Domains (1) summary
    pfam01674
    Location:68 → 320
    Lipase_2; Lipase (class 2)

  2. NM_001268660.3 → NP_001255589.1  Lipase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255589.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2X1
    Conserved Domains (1) summary
    pfam01674
    Location:68 → 334
    Lipase_2; Lipase (class 2)

  3. NM_001268659.2 → NP_001255588.1  Lipase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255588.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2X2
    Conserved Domains (1) summary
    pfam01674
    Location:68 → 331
    Lipase_2; Lipase (class 2)

  4. NM_001083238.2 → NP_001076707.1  Lipase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001076707.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q067X8
    Conserved Domains (1) summary
    cl21494
    Location:1 → 36
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
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