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SPAPADRAFT_73326 uncharacterized protein [ Spathaspora passalidarum NRRL Y-27907 ]

Gene ID: 18875478, updated on 30-Dec-2023

Summary

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Gene symbol
SPAPADRAFT_73326
Gene description
uncharacterized protein
Locus tag
SPAPADRAFT_73326
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Spathaspora passalidarum NRRL Y-27907 (strain: NRRL Y-27907, type-material: type material of Spathaspora passalidarum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Spathaspora
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Genomic context

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See SPAPADRAFT_73326 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_006767432.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene formate dehydrogenase-like protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006767432.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of xylose-fermenting fungi for enhanced biofuel production. Wohlbach DJ, et al. Proc Natl Acad Sci U S A, 2011 Aug 9. PMID 21788494, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_007377632.1
  • conserved hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006767432.1 Reference assembly

    Range
    58815..61616
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007377570.1 → XP_007377632.1  uncharacterized protein SPAPADRAFT_73326 [Spathaspora passalidarum NRRL Y-27907]

    See identical proteins and their annotated locations for XP_007377632.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G3AV63
    Conserved Domains (3) summary
    COG2319
    Location:524 → 703
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:524 → 568
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:218 → 703
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases