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SPAPADRAFT_73373 uncharacterized protein [ Spathaspora passalidarum NRRL Y-27907 ]

Gene ID: 18875481, updated on 30-Dec-2023

Summary

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Gene symbol
SPAPADRAFT_73373
Gene description
uncharacterized protein
Locus tag
SPAPADRAFT_73373
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Spathaspora passalidarum NRRL Y-27907 (strain: NRRL Y-27907, type-material: type material of Spathaspora passalidarum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Spathaspora
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Genomic context

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See SPAPADRAFT_73373 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_006767432.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene phosphofructokinase beta-subunit Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006767432.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of xylose-fermenting fungi for enhanced biofuel production. Wohlbach DJ, et al. Proc Natl Acad Sci U S A, 2011 Aug 9. PMID 21788494, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ascospore wall assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in prospore membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_007377694.1
  • conserved hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006767432.1 Reference assembly

    Range
    195907..197244
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007377632.1 → XP_007377694.1  uncharacterized protein SPAPADRAFT_73373 [Spathaspora passalidarum NRRL Y-27907]

    See identical proteins and their annotated locations for XP_007377694.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G3AVH9
    Conserved Domains (2) summary
    COG0726
    Location:22 → 254
    CDA1; Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis]
    cl15692
    Location:90 → 262
    CE4_SF; Catalytic NodB homology domain of the carbohydrate esterase 4 superfamily
Nucleotide Protein
Heading Accession and Version

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