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T25D3.3 Tryptophan synthase beta chain-like PALP domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 188894, updated on 4-Jan-2025

Summary

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Official Symbol
T25D3.3
Official Full Name
Tryptophan synthase beta chain-like PALP domain-containing protein
Primary source
WormBase:WBGene00020797
Locus tag
CELE_T25D3.3
See related
AllianceGenome:WB:WBGene00020797
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in cysteine biosynthetic process. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See T25D3.3 in Genome Data Viewer
Location:
chromosome: II
Exon count:
6
Sequence:
Chromosome: II; NC_003280.10 (152583..154945)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene ncRNA Neighboring gene Large ribosomal subunit protein bL28m Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in cysteine biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in cysteine biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Tryptophan synthase beta chain-like PALP domain-containing protein
NP_493671.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    152583..154945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_061270.7 → NP_493671.2  Tryptophan synthase beta chain-like PALP domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_493671.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q965I8
Nucleotide Protein
Heading Accession and Version

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